Model info
Transcription factorSOX11
ModelSOX11_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length16
Quality
D
Motif rank
0
ConsensusRACAMTRhMATTGTYb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words220
TF familySOX-related factors{4.1.1}
TF subfamilyGroup C{4.1.1.3}
HGNC11191
EntrezGene6664
UniProt IDSOX11_HUMAN
UniProt ACP35716
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.08706
0.0005 4.38246
0.0001 7.103710000000001
GTEx tissue expression atlas SOX11 expression
ReMap ChIP-seq dataset list SOX11 datasets
Motifs in JASPAR
PCM
ACGT
01131.534.539.514.5
02190.2511.255.2513.25
035.5197.59.57.5
04199.06.04.011.0
05121.593.52.52.5
060.751.750.75216.75
0760.258.25151.250.25
0886.092.016.026.0
09137.071.00.012.0
10220.00.00.00.0
110.07.00.0213.0
120.04.00.0216.0
133.258.25208.250.25
1412.511.50.5195.5
1510.032.030.0148.0
1633.577.540.568.5
PWM
ACGT
010.858-0.452-0.322-1.268
021.224-1.498-2.145-1.351
03-2.1081.261-1.648-1.851
041.269-2.037-2.355-1.518
050.7790.521-2.684-2.684
06-3.29-2.901-3.291.353
070.089-1.770.996-3.563
080.4380.505-1.178-0.723
090.8980.25-3.733-1.44
101.368-3.733-3.733-3.733
11-3.733-1.909-3.7331.336
12-3.733-2.355-3.7331.35
13-2.506-1.771.314-3.563
14-1.403-1.478-3.4171.251
15-1.602-0.525-0.5860.975
16-0.4810.336-0.2980.215