Model info
Transcription factorSOX15
ModelSOX15_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length7
Quality
D
Motif rank
0
ConsensusCWTTGTT
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familySOX-related factors{4.1.1}
TF subfamilyGroup G{4.1.1.7}
HGNC11196
EntrezGene6665
UniProt IDSOX15_HUMAN
UniProt ACO60248
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.093
0.0005 5.940525
0.0001 7.28455
GTEx tissue expression atlas SOX15 expression
ReMap ChIP-seq dataset list SOX15 datasets
Motifs in JASPAR
PCM
ACGT
010.08.00.00.0
024.1141.0290.02.857
030.00.00.08.0
040.00.00.08.0
050.00.08.00.0
060.00.01.0296.971
071.1710.2570.2576.314
PWM
ACGT
01-1.5781.218-1.578-1.578
020.609-0.487-1.5780.293
03-1.578-1.578-1.5781.218
04-1.578-1.578-1.5781.218
05-1.578-1.5781.218-1.578
06-1.578-1.578-0.4871.09
07-0.399-1.177-1.1770.998