Model info
Transcription factorSOX21
ModelSOX21_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length16
Quality
D
Motif rank
0
ConsensusdRWSAATGdYAKTSWb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words14076
TF familySOX-related factors{4.1.1}
TF subfamilyGroup B{4.1.1.2}
HGNC11197
EntrezGene11166
UniProt IDSOX21_HUMAN
UniProt ACQ9Y651
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.9431599999999998
0.0005 5.18576
0.0001 7.737410000000001
GTEx tissue expression atlas SOX21 expression
ReMap ChIP-seq dataset list SOX21 datasets
Motifs in JASPAR
PCM
ACGT
015083.751851.754821.752318.75
028487.751840.752416.751330.75
038335.5481.51636.53622.5
04400.259859.252904.25912.25
0513806.7526.75190.7551.75
0613642.511.5155.5266.5
0737.2523.25235.2513780.25
0857.520.510298.53699.5
091364.251050.256320.255341.25
10440.04920.0219.08497.0
1113579.75111.75265.75118.75
12212.25124.255829.257910.25
13252.25150.25340.2513333.25
141010.752775.759902.75386.75
153699.5276.5558.59541.5
161503.02576.02807.07190.0
PWM
ACGT
010.368-0.6410.315-0.417
020.88-0.647-0.375-0.971
030.862-1.985-0.7650.029
04-2.1691.03-0.192-1.348
051.366-4.795-2.903-4.175
061.355-5.536-3.105-2.572
07-4.487-4.923-2.6961.365
08-4.074-5.0361.0730.05
09-0.947-1.2080.5850.417
10-2.0740.335-2.7670.881
111.35-3.429-2.575-3.37
12-2.798-3.3250.5040.81
13-2.627-3.139-2.331.332
14-1.246-0.2371.034-2.203
150.05-2.536-1.8370.997
16-0.85-0.312-0.2260.714