Model info
Transcription factorSOX8
ModelSOX8_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length16
Quality
D
Motif rank
0
ConsensusWvACTGhAATTSWYbh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words4026
TF familySOX-related factors{4.1.1}
TF subfamilyGroup E{4.1.1.5}
HGNC11203
EntrezGene30812
UniProt IDSOX8_HUMAN
UniProt ACP57073
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.4097100000000005
0.0005 5.59191
0.0001 7.99701
GTEx tissue expression atlas SOX8 expression
ReMap ChIP-seq dataset list SOX8 datasets
Motifs in JASPAR
PCM
ACGT
011435.608327.92293.312344.188
02729.7652168.7431199.496303.022
033609.383350.537218.434222.672
04443.0873569.103183.117205.72
0547.32464.27633.1984256.228
06666.327147.823549.97336.906
071264.4942008.381537.579590.573
083519.247849.6411.94230.196
094268.235101.0064.23827.547
1050.856137.7552.8254209.59
114.23893.2562.1194301.413
1268.5141186.7972507.758637.957
132829.984110.18855.0941405.76
14102.07596.582277.263425.114
15692.869802.9981623.8751281.284
16776.2071655.631589.6761379.513
PWM
ACGT
010.266-1.206-1.3170.755
02-0.410.6780.086-1.285
031.187-1.14-1.609-1.59
04-0.9071.175-1.784-1.669
05-3.105-2.81-3.4411.351
06-0.5-1.9951.17-3.342
070.1390.601-0.714-0.621
081.161-0.258-5.609-3.53
091.354-2.369-5.159-3.616
10-3.036-2.065-5.4111.34
11-5.159-2.448-5.5661.362
12-2.7480.0760.823-0.544
130.944-2.284-2.9590.245
14-2.359-0.61-1.3731.134
15-0.461-0.3140.3890.152
16-0.3480.408-0.6220.226