Model info
Transcription factorSP1
ModelSP1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length22
Quality
A
Motif rank
0
ConsensusnRGGGGCGGGGCSdSSvSSSvS
Best auROC (human)0.9997379827477314
Best auROC (mouse)0.9568786241314247
Peak sets in benchmark (human)53
Peak sets in benchmark (mouse)11
Aligned words499
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
HGNC11205
EntrezGene6667
UniProt IDSP1_HUMAN
UniProt ACP08047
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -3.01649
0.0005 -1.57409
0.0001 1.47656
GTEx tissue expression atlas SP1 expression
ReMap ChIP-seq dataset list SP1 datasets
Motifs in JASPAR
PCM
ACGT
01157.0103.0166.073.0
0296.050.0334.019.0
0322.04.0404.069.0
0429.04.0466.00.0
050.04.0495.00.0
062.00.0497.00.0
0716.0476.02.05.0
085.00.0493.01.0
091.04.0462.032.0
1033.01.0457.08.0
119.015.0455.020.0
1230.0433.07.029.0
1329.0297.095.078.0
1472.056.0231.0140.0
1541.088.0352.018.0
1657.083.0340.019.0
1780.098.0287.034.0
1844.0133.0293.029.0
1960.0116.0290.033.0
2059.072.0314.054.0
2160.060.0352.027.0
2284.093.0304.018.0
PWM
ACGT
010.227-0.1890.283-0.527
02-0.258-0.8960.977-1.816
03-1.679-3.1241.167-0.582
04-1.419-3.1241.309-4.398
05-4.398-3.1241.369-4.398
06-3.571-4.3981.373-4.398
07-1.9731.33-3.571-2.959
08-2.959-4.3981.365-3.901
09-3.901-3.1241.3-1.326
10-1.296-3.9011.289-2.582
11-2.482-2.0321.285-1.768
12-1.3871.236-2.692-1.419
13-1.4190.86-0.269-0.462
14-0.541-0.7860.610.114
15-1.088-0.3441.029-1.866
16-0.769-0.4010.995-1.816
17-0.437-0.2380.826-1.268
18-1.020.0630.847-1.419
19-0.719-0.0720.837-1.296
20-0.735-0.5410.916-0.821
21-0.719-0.7191.029-1.487
22-0.39-0.290.883-1.866