Model info
Transcription factorSp1
ModelSP1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length24
Quality
A
Motif rank
0
ConsensusSSvSRvRSvRRRGGMGGRGMvKSR
Best auROC (human)0.9985141282229069
Best auROC (mouse)0.9880159847304257
Peak sets in benchmark (human)53
Peak sets in benchmark (mouse)11
Aligned words489
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
MGI98372
EntrezGene20683
UniProt IDSP1_MOUSE
UniProt ACO89090
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.33231
0.0005 1.5048599999999999
0.0001 4.00876
GTEx tissue expression atlas Sp1 expression
Motifs in JASPAR
PCM
ACGT
0129.069.0349.042.0
0261.076.0318.034.0
03113.0129.0222.025.0
0468.087.0308.026.0
0566.055.0355.013.0
06117.058.0270.044.0
0777.024.0361.027.0
0877.0119.0279.014.0
09195.0117.0110.067.0
1084.043.0351.011.0
1164.027.0377.021.0
1286.026.0360.017.0
1356.024.0391.018.0
1424.08.0453.04.0
15152.0299.07.031.0
1632.06.0447.04.0
1720.011.0454.04.0
18126.014.0340.09.0
1917.09.0455.08.0
20122.0284.057.026.0
2188.0188.0170.043.0
2257.038.0335.059.0
2358.063.0350.018.0
2477.058.0342.012.0
PWM
ACGT
01-1.399-0.5621.041-1.045
02-0.683-0.4680.948-1.248
03-0.0780.0530.591-1.54
04-0.577-0.3350.916-1.503
05-0.606-0.7841.058-2.141
06-0.043-0.7320.785-1.0
07-0.455-1.5781.075-1.467
08-0.455-0.0270.818-2.075
090.462-0.043-0.104-0.591
10-0.37-1.0221.047-2.289
11-0.636-1.4671.118-1.703
12-0.346-1.5031.072-1.898
13-0.766-1.5781.154-1.846
14-1.578-2.5621.301-3.105
150.2150.887-2.673-1.336
16-1.306-2.7971.287-3.105
17-1.748-2.2891.303-3.105
180.03-2.0751.015-2.463
19-1.898-2.4631.305-2.562
20-0.0020.836-0.749-1.503
21-0.3240.4260.326-1.022
22-0.749-1.1411.0-0.715
23-0.732-0.6511.044-1.846
24-0.455-0.7321.021-2.212