Model info
Transcription factorSP2
ModelSP2_HUMAN.H11MO.1.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
B
Motif rank
1
ConsensusdRRGGGCGGGRM
Best auROC (human)0.8932684252311811
Best auROC (mouse)
Peak sets in benchmark (human)16
Peak sets in benchmark (mouse)
Aligned words498
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
HGNC11207
EntrezGene6668
UniProt IDSP2_HUMAN
UniProt ACQ02086
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.801465
0.0005 3.9386599999999996
0.0001 6.23043
GTEx tissue expression atlas SP2 expression
ReMap ChIP-seq dataset list SP2 datasets
Motifs in JASPAR
PCM
ACGT
01224.041.0172.061.0
02129.016.0333.020.0
0375.03.0368.052.0
04178.00.0320.00.0
052.02.0494.00.0
061.02.0493.02.0
0779.0385.00.034.0
0811.06.0470.011.0
093.01.0483.011.0
1049.010.0410.029.0
11114.017.0345.022.0
12119.0320.039.020.0
PWM
ACGT
010.582-1.0860.32-0.701
020.035-1.9710.976-1.766
03-0.499-3.3211.076-0.856
040.354-4.3970.936-4.397
05-3.569-3.5691.369-4.397
06-3.9-3.5691.367-3.569
07-0.4481.121-4.397-1.266
08-2.307-2.8151.319-2.307
09-3.321-3.91.347-2.307
10-0.914-2.391.183-1.417
11-0.087-1.9161.011-1.677
12-0.0450.936-1.134-1.766