Model info
Transcription factorSp4
ModelSP4_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
B
Motif rank
0
ConsensusvvSvdRRRGGMGGRGMhdvv
Best auROC (human)0.9834854825110978
Best auROC (mouse)
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)
Aligned words499
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
MGI107595
EntrezGene
UniProt IDSP4_MOUSE
UniProt ACQ62445
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.62216
0.0005 4.53416
0.0001 6.42736
GTEx tissue expression atlas Sp4 expression
Motifs in JASPAR
PCM
ACGT
01111.0124.0227.037.0
02133.074.0231.061.0
0370.090.0302.037.0
04202.0125.0124.048.0
05263.056.0112.068.0
06173.013.0274.039.0
07115.09.0318.057.0
08171.010.0307.011.0
0934.06.0450.09.0
1018.02.0467.012.0
1162.0384.05.048.0
1228.08.0427.036.0
1327.09.0430.033.0
14176.015.0283.025.0
15107.05.0373.014.0
1699.0298.071.031.0
17124.0207.062.0106.0
18163.039.0182.0115.0
19151.056.0249.043.0
20166.071.0215.047.0
PWM
ACGT
01-0.115-0.0060.593-1.187
020.063-0.5140.61-0.703
03-0.568-0.3220.877-1.187
040.4770.002-0.006-0.936
050.739-0.786-0.106-0.597
060.324-2.1610.78-1.136
07-0.08-2.4820.928-0.769
080.312-2.3920.893-2.309
09-1.268-2.8171.274-2.482
10-1.866-3.5711.311-2.232
11-0.6871.116-2.959-0.936
12-1.452-2.5821.222-1.213
13-1.487-2.4821.229-1.296
140.341-2.0320.812-1.56
15-0.151-2.9591.087-2.094
16-0.2280.864-0.554-1.356
17-0.0060.502-0.687-0.161
180.265-1.1360.374-0.08
190.189-0.7860.685-1.042
200.283-0.5540.539-0.956