Model info
Transcription factorSp4
ModelSP4_MOUSE.H11MO.1.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
B
Motif rank
1
ConsensusRvRRRGGGMGGRGvnd
Best auROC (human)0.9826502647505044
Best auROC (mouse)
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)
Aligned words496
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
MGI107595
EntrezGene
UniProt IDSP4_MOUSE
UniProt ACQ62445
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.8773099999999996
0.0005 4.00266
0.0001 6.3308599999999995
GTEx tissue expression atlas Sp4 expression
Motifs in JASPAR
PCM
ACGT
0199.024.0354.019.0
02168.045.0251.032.0
03242.014.0204.036.0
04181.012.0288.015.0
05111.06.0325.054.0
06108.03.0382.03.0
074.02.0486.04.0
089.05.0480.02.0
09168.0301.00.027.0
107.00.0476.013.0
117.07.0455.027.0
12126.05.0347.018.0
1370.011.0402.013.0
14128.0272.061.035.0
1572.0178.0110.0136.0
16109.044.0219.0124.0
PWM
ACGT
01-0.222-1.5921.041-1.81
020.3-0.9920.699-1.32
030.663-2.0890.493-1.207
040.374-2.2260.836-2.026
05-0.109-2.8110.956-0.815
06-0.136-3.3171.117-3.317
07-3.119-3.5651.357-3.119
08-2.476-2.9531.344-3.565
090.30.88-4.393-1.481
10-2.687-4.3931.336-2.155
11-2.687-2.6871.291-1.481
120.016-2.9531.021-1.86
13-0.562-2.3031.168-2.155
140.0310.779-0.697-1.234
15-0.5350.358-0.1180.091
16-0.127-1.0140.5630.0