Model info
Transcription factorSp5
ModelSP5_MOUSE.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
1
ConsensusdvdvdGGGMGGRG
Best auROC (human)
Best auROC (mouse)0.9401599196956508
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words458
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
MGI1927715
EntrezGene64406
UniProt IDSP5_MOUSE
UniProt ACQ9JHX2
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.59671
0.0005 5.49936
0.0001 7.3243100000000005
GTEx tissue expression atlas Sp5 expression
Motifs in JASPAR
PCM
ACGT
0161.046.0267.072.0
02119.074.0219.034.0
03183.038.0166.059.0
04111.055.0226.054.0
05103.013.0204.0126.0
06127.00.0319.00.0
073.02.0435.06.0
0838.015.0385.08.0
09279.0124.01.042.0
1054.02.0384.06.0
1122.09.0382.033.0
12252.08.0167.019.0
1322.015.0394.015.0
PWM
ACGT
01-0.592-0.8660.865-0.43
020.064-0.4030.668-1.157
030.49-1.0510.394-0.625
04-0.004-0.6930.7-0.711
05-0.078-2.0520.5980.121
060.129-4.3061.042-4.306
07-3.218-3.4681.351-2.709
08-1.051-1.9231.23-2.474
090.9090.105-3.801-0.954
10-0.711-3.4681.227-2.709
11-1.57-2.3741.222-1.186
120.808-2.4740.399-1.706
13-1.57-1.9231.253-1.923