Transcription factor | Sp7 | ||||||||
Model | SP7_MOUSE.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 16 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | vhRvSMWvYMATTWnn | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | 0.979 | ||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | 19 | ||||||||
Aligned words | 410 | ||||||||
TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
TF subfamily | Sp1-like factors {2.3.1.1} | ||||||||
MGI | MGI:2153568 | ||||||||
EntrezGene | GeneID:170574 (SSTAR profile) | ||||||||
UniProt ID | SP7_MOUSE | ||||||||
UniProt AC | Q8VI67 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Sp7 expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 62.0 | 28.0 | 21.0 | 36.0 | 80.0 | 20.0 | 2.0 | 32.0 | 47.0 | 16.0 | 6.0 | 22.0 | 13.0 | 9.0 | 8.0 | 8.0 |
02 | 154.0 | 4.0 | 30.0 | 14.0 | 61.0 | 5.0 | 4.0 | 3.0 | 26.0 | 2.0 | 9.0 | 0.0 | 76.0 | 4.0 | 8.0 | 10.0 |
03 | 114.0 | 115.0 | 70.0 | 18.0 | 4.0 | 7.0 | 0.0 | 4.0 | 12.0 | 16.0 | 18.0 | 5.0 | 9.0 | 11.0 | 1.0 | 6.0 |
04 | 7.0 | 111.0 | 16.0 | 5.0 | 20.0 | 113.0 | 0.0 | 16.0 | 8.0 | 49.0 | 27.0 | 5.0 | 9.0 | 14.0 | 8.0 | 2.0 |
05 | 4.0 | 35.0 | 0.0 | 5.0 | 41.0 | 219.0 | 5.0 | 22.0 | 1.0 | 31.0 | 10.0 | 9.0 | 6.0 | 19.0 | 2.0 | 1.0 |
06 | 3.0 | 4.0 | 1.0 | 44.0 | 37.0 | 45.0 | 7.0 | 215.0 | 0.0 | 0.0 | 1.0 | 16.0 | 17.0 | 0.0 | 9.0 | 11.0 |
07 | 13.0 | 9.0 | 32.0 | 3.0 | 24.0 | 11.0 | 6.0 | 8.0 | 3.0 | 7.0 | 8.0 | 0.0 | 111.0 | 17.0 | 149.0 | 9.0 |
08 | 5.0 | 21.0 | 6.0 | 119.0 | 0.0 | 12.0 | 1.0 | 31.0 | 6.0 | 34.0 | 2.0 | 153.0 | 1.0 | 10.0 | 3.0 | 6.0 |
09 | 9.0 | 2.0 | 1.0 | 0.0 | 63.0 | 6.0 | 0.0 | 8.0 | 5.0 | 6.0 | 0.0 | 1.0 | 192.0 | 49.0 | 32.0 | 36.0 |
10 | 237.0 | 9.0 | 0.0 | 23.0 | 60.0 | 1.0 | 1.0 | 1.0 | 22.0 | 0.0 | 2.0 | 9.0 | 42.0 | 1.0 | 0.0 | 2.0 |
11 | 1.0 | 2.0 | 5.0 | 353.0 | 0.0 | 1.0 | 0.0 | 10.0 | 0.0 | 0.0 | 0.0 | 3.0 | 1.0 | 1.0 | 2.0 | 31.0 |
12 | 0.0 | 0.0 | 0.0 | 2.0 | 1.0 | 1.0 | 0.0 | 2.0 | 0.0 | 2.0 | 0.0 | 5.0 | 4.0 | 43.0 | 6.0 | 344.0 |
13 | 5.0 | 0.0 | 0.0 | 0.0 | 35.0 | 1.0 | 0.0 | 10.0 | 5.0 | 0.0 | 0.0 | 1.0 | 223.0 | 8.0 | 7.0 | 115.0 |
14 | 60.0 | 52.0 | 52.0 | 104.0 | 3.0 | 2.0 | 1.0 | 3.0 | 4.0 | 2.0 | 1.0 | 0.0 | 21.0 | 25.0 | 29.0 | 51.0 |
15 | 33.0 | 18.0 | 27.0 | 10.0 | 38.0 | 21.0 | 6.0 | 16.0 | 16.0 | 20.0 | 16.0 | 31.0 | 24.0 | 56.0 | 57.0 | 21.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.875 | 0.087 | -0.196 | 0.336 | 1.129 | -0.244 | -2.393 | 0.219 | 0.6 | -0.462 | -1.406 | -0.15 | -0.665 | -1.02 | -1.133 | -1.133 |
02 | 1.781 | -1.782 | 0.156 | -0.593 | 0.859 | -1.576 | -1.782 | -2.041 | 0.014 | -2.393 | -1.02 | -4.236 | 1.078 | -1.782 | -1.133 | -0.919 |
03 | 1.481 | 1.49 | 0.996 | -0.347 | -1.782 | -1.26 | -4.236 | -1.782 | -0.742 | -0.462 | -0.347 | -1.576 | -1.02 | -0.827 | -2.939 | -1.406 |
04 | -1.26 | 1.455 | -0.462 | -1.576 | -0.244 | 1.473 | -4.236 | -0.462 | -1.133 | 0.641 | 0.052 | -1.576 | -1.02 | -0.593 | -1.133 | -2.393 |
05 | -1.782 | 0.308 | -4.236 | -1.576 | 0.465 | 2.133 | -1.576 | -0.15 | -2.939 | 0.188 | -0.919 | -1.02 | -1.406 | -0.294 | -2.393 | -2.939 |
06 | -2.041 | -1.782 | -2.939 | 0.535 | 0.363 | 0.557 | -1.26 | 2.114 | -4.236 | -4.236 | -2.939 | -0.462 | -0.403 | -4.236 | -1.02 | -0.827 |
07 | -0.665 | -1.02 | 0.219 | -2.041 | -0.065 | -0.827 | -1.406 | -1.133 | -2.041 | -1.26 | -1.133 | -4.236 | 1.455 | -0.403 | 1.748 | -1.02 |
08 | -1.576 | -0.196 | -1.406 | 1.524 | -4.236 | -0.742 | -2.939 | 0.188 | -1.406 | 0.279 | -2.393 | 1.775 | -2.939 | -0.919 | -2.041 | -1.406 |
09 | -1.02 | -2.393 | -2.939 | -4.236 | 0.891 | -1.406 | -4.236 | -1.133 | -1.576 | -1.406 | -4.236 | -2.939 | 2.001 | 0.641 | 0.219 | 0.336 |
10 | 2.212 | -1.02 | -4.236 | -0.106 | 0.842 | -2.939 | -2.939 | -2.939 | -0.15 | -4.236 | -2.393 | -1.02 | 0.488 | -2.939 | -4.236 | -2.393 |
11 | -2.939 | -2.393 | -1.576 | 2.609 | -4.236 | -2.939 | -4.236 | -0.919 | -4.236 | -4.236 | -4.236 | -2.041 | -2.939 | -2.939 | -2.393 | 0.188 |
12 | -4.236 | -4.236 | -4.236 | -2.393 | -2.939 | -2.939 | -4.236 | -2.393 | -4.236 | -2.393 | -4.236 | -1.576 | -1.782 | 0.512 | -1.406 | 2.584 |
13 | -1.576 | -4.236 | -4.236 | -4.236 | 0.308 | -2.939 | -4.236 | -0.919 | -1.576 | -4.236 | -4.236 | -2.939 | 2.151 | -1.133 | -1.26 | 1.49 |
14 | 0.842 | 0.7 | 0.7 | 1.39 | -2.041 | -2.393 | -2.939 | -2.041 | -1.782 | -2.393 | -2.939 | -4.236 | -0.196 | -0.024 | 0.122 | 0.681 |
15 | 0.25 | -0.347 | 0.052 | -0.919 | 0.389 | -0.196 | -1.406 | -0.462 | -0.462 | -0.244 | -0.462 | 0.188 | -0.065 | 0.774 | 0.791 | -0.196 |