Model info
Transcription factorSPIC
ModelSPIC_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length13
Quality
D
Motif rank
0
ConsensusdvddRWGKRdddd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words263
TF familyEts-related factors{3.5.2}
TF subfamilySpi-like factors{3.5.2.5}
HGNC29549
EntrezGene121599
UniProt IDSPIC_HUMAN
UniProt ACQ8N5J4
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.406359999999999
0.0005 5.89101
0.0001 6.8030100000000004
GTEx tissue expression atlas SPIC expression
ReMap ChIP-seq dataset list SPIC datasets
Motifs in JASPAR
PCM
ACGT
0151.40840.838103.16168.015
0292.72946.66688.64235.384
0369.44413.746104.176.131
0469.428.05126.43559.518
05131.9470.071.81559.66
06162.5793.2320.097.611
070.00.0263.4220.0
080.021.914176.03365.475
0943.98819.617186.66513.152
1052.24123.702110.01377.467
11102.26816.89286.89957.363
1299.24120.917111.63631.629
1352.99328.621141.03240.776
PWM
ACGT
01-0.242-0.4650.4410.032
020.336-0.3360.292-0.604
030.052-1.4910.450.142
040.052-1.9630.642-0.099
050.685-3.8770.085-0.097
060.891-2.677-3.8770.387
07-3.877-3.8771.371-3.877
08-3.877-1.060.97-0.006
09-0.393-1.1631.028-1.531
10-0.226-0.9860.5050.159
110.433-1.3020.272-0.135
120.403-1.1030.519-0.711
13-0.212-0.8070.75-0.467