Model info
Transcription factorSrebf1
ModelSRBP1_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
B
Motif rank
0
ConsensusvRTSRSSWGWb
Best auROC (human)0.892665222282328
Best auROC (mouse)0.7346142777761784
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)23
Aligned words2191
TF familybHLH-ZIP factors{1.2.6}
TF subfamilySREBP factors{1.2.6.3}
MGI107606
EntrezGene20787
UniProt IDSRBP1_MOUSE
UniProt ACQ9WTN3
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.72408
0.0005 5.527830000000001
0.0001 7.05484
GTEx tissue expression atlas Srebf1 expression
Motifs in JASPAR
PCM
ACGT
01428.377462.09989.497289.741
02502.441461.5531167.93237.778
0346.24120.64754.0111948.806
04143.263538.7831374.386113.272
05605.5696.8471440.052117.236
06145.802591.3281242.838189.736
0784.199681.6681397.5486.29
08212.667176.748108.0781672.21
096.85851.5142096.53314.799
101719.64760.749113.335275.972
1173.036505.389932.93658.349
PWM
ACGT
01-0.235-0.160.6-0.624
02-0.076-0.1610.765-2.618
03-2.425-1.491-2.2751.276
04-1.322-0.0070.928-1.553
050.11-4.1290.974-1.519
06-1.3040.0860.827-1.044
07-1.8440.2280.944-4.194
08-0.931-1.114-1.5991.123
09-4.127-2.3211.349-3.483
101.151-2.162-1.552-0.672
11-1.983-0.070.5410.193