Model info
Transcription factorSrebf2
ModelSRBP2_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
B
Motif rank
0
ConsensusvvvWGGvSWGRnb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words2363
TF familybHLH-ZIP factors{1.2.6}
TF subfamilySREBP factors{1.2.6.3}
MGI107585
EntrezGene20788
UniProt IDSRBP2_MOUSE
UniProt ACQ3U1N2
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.82666
0.0005 5.56316
0.0001 6.995360000000001
GTEx tissue expression atlas Srebf2 expression
Motifs in JASPAR
PCM
ACGT
01609.707577.904878.334276.055
02405.721707.176964.952264.152
03494.205386.7331331.932129.129
04350.404113.691143.5321734.374
0550.24477.7382128.85985.159
06121.65613.3662201.5235.456
07411.337516.6251149.069264.969
08260.005537.91514.6929.404
09677.944351.21725.8051287.034
1058.592183.522042.55157.336
111637.54346.971526.174131.312
12368.512440.031865.337668.12
13371.105490.7931055.59424.512
PWM
ACGT
010.04-0.0130.404-0.748
02-0.3650.1880.498-0.792
03-0.169-0.4130.82-1.5
04-0.511-1.625-1.3961.084
05-2.421-1.9981.288-1.909
06-1.559-3.6481.322-4.375
07-0.352-0.1250.673-0.789
08-0.808-0.0850.948-2.931
090.146-0.509-3.0530.786
10-2.273-1.1531.247-2.294
111.026-2.486-0.106-1.484
12-0.461-0.2850.390.132
13-0.454-0.1760.588-0.32