Model info
Transcription factorSRY
ModelSRY_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
B
Motif rank
0
ConsensusbWTTGTWWh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words108
TF familySOX-related factors{4.1.1}
TF subfamilyGroup A{4.1.1.1}
HGNC11311
EntrezGene6736
UniProt IDSRY_HUMAN
UniProt ACQ05066
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.965945
0.0005 6.55035
0.0001 7.951230000000001
GTEx tissue expression atlas SRY expression
ReMap ChIP-seq dataset list SRY datasets
Motifs in JASPAR
PCM
ACGT
0111.26730.8215.22850.685
0239.63.964.80559.634
038.4170.4974.45794.628
0410.2570.4973.26493.982
050.07.9298.291.79
065.9650.03.77898.256
0720.7954.3413.67979.186
0828.15110.2247.53962.085
0936.60226.1312.83442.434
PWM
ACGT
01-0.8180.127-0.5410.61
020.37-1.703-1.5510.769
03-1.078-2.827-1.6111.224
04-0.902-2.827-1.8491.217
05-3.181-1.1311.261-2.253
06-1.373-3.181-1.7391.261
07-0.249-1.631-1.7591.048
080.04-0.905-1.1740.809
090.293-0.031-1.9510.437