Transcription factor | Stat5b | ||||||||
Model | STA5B_MOUSE.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 13 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | nnTTCYTRGAAvn | ||||||||
Best auROC (human) | 0.966 | ||||||||
Best auROC (mouse) | 0.965 | ||||||||
Peak sets in benchmark (human) | 16 | ||||||||
Peak sets in benchmark (mouse) | 31 | ||||||||
Aligned words | 501 | ||||||||
TF family | STAT factors {6.2.1} | ||||||||
TF subfamily | STAT5B {6.2.1.0.6} | ||||||||
MGI | MGI:103035 | ||||||||
EntrezGene | GeneID:20851 (SSTAR profile) | ||||||||
UniProt ID | STA5B_MOUSE | ||||||||
UniProt AC | P42232 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Stat5b expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 35.0 | 20.0 | 56.0 | 54.0 | 13.0 | 27.0 | 6.0 | 34.0 | 25.0 | 40.0 | 27.0 | 51.0 | 11.0 | 27.0 | 15.0 | 59.0 |
02 | 1.0 | 1.0 | 0.0 | 82.0 | 1.0 | 0.0 | 0.0 | 113.0 | 1.0 | 0.0 | 0.0 | 103.0 | 0.0 | 3.0 | 0.0 | 195.0 |
03 | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 | 4.0 | 0.0 | 0.0 | 0.0 | 0.0 | 18.0 | 10.0 | 6.0 | 459.0 |
04 | 1.0 | 17.0 | 0.0 | 0.0 | 0.0 | 10.0 | 0.0 | 0.0 | 0.0 | 6.0 | 0.0 | 0.0 | 5.0 | 452.0 | 2.0 | 7.0 |
05 | 0.0 | 4.0 | 1.0 | 1.0 | 41.0 | 177.0 | 13.0 | 254.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 6.0 | 0.0 | 1.0 |
06 | 0.0 | 0.0 | 32.0 | 9.0 | 0.0 | 0.0 | 35.0 | 154.0 | 0.0 | 0.0 | 6.0 | 8.0 | 0.0 | 0.0 | 160.0 | 96.0 |
07 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 132.0 | 9.0 | 78.0 | 14.0 | 78.0 | 4.0 | 173.0 | 12.0 |
08 | 3.0 | 1.0 | 201.0 | 5.0 | 0.0 | 0.0 | 12.0 | 1.0 | 0.0 | 0.0 | 245.0 | 6.0 | 1.0 | 0.0 | 23.0 | 2.0 |
09 | 3.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 443.0 | 5.0 | 11.0 | 22.0 | 9.0 | 3.0 | 1.0 | 1.0 |
10 | 445.0 | 3.0 | 6.0 | 2.0 | 8.0 | 0.0 | 0.0 | 0.0 | 12.0 | 1.0 | 0.0 | 0.0 | 23.0 | 0.0 | 0.0 | 0.0 |
11 | 219.0 | 111.0 | 82.0 | 76.0 | 2.0 | 0.0 | 1.0 | 1.0 | 4.0 | 0.0 | 2.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 |
12 | 57.0 | 48.0 | 44.0 | 76.0 | 21.0 | 29.0 | 4.0 | 59.0 | 21.0 | 25.0 | 18.0 | 21.0 | 15.0 | 16.0 | 14.0 | 32.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.112 | -0.439 | 0.578 | 0.542 | -0.86 | -0.144 | -1.6 | 0.083 | -0.22 | 0.244 | -0.144 | 0.485 | -1.022 | -0.144 | -0.721 | 0.63 |
02 | -3.126 | -3.126 | -4.4 | 0.957 | -3.126 | -4.4 | -4.4 | 1.276 | -3.126 | -4.4 | -4.4 | 1.184 | -4.4 | -2.234 | -4.4 | 1.821 |
03 | -4.4 | -4.4 | -4.4 | -2.234 | -4.4 | -4.4 | -4.4 | -1.975 | -4.4 | -4.4 | -4.4 | -4.4 | -0.543 | -1.114 | -1.6 | 2.676 |
04 | -3.126 | -0.599 | -4.4 | -4.4 | -4.4 | -1.114 | -4.4 | -4.4 | -4.4 | -1.6 | -4.4 | -4.4 | -1.77 | 2.66 | -2.584 | -1.454 |
05 | -4.4 | -1.975 | -3.126 | -3.126 | 0.269 | 1.724 | -0.86 | 2.084 | -4.4 | -2.584 | -4.4 | -4.4 | -4.4 | -1.6 | -4.4 | -3.126 |
06 | -4.4 | -4.4 | 0.023 | -1.215 | -4.4 | -4.4 | 0.112 | 1.585 | -4.4 | -4.4 | -1.6 | -1.328 | -4.4 | -4.4 | 1.623 | 1.114 |
07 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | 1.431 | -1.215 | 0.907 | -0.788 | 0.907 | -1.975 | 1.701 | -0.938 |
08 | -2.234 | -3.126 | 1.851 | -1.77 | -4.4 | -4.4 | -0.938 | -3.126 | -4.4 | -4.4 | 2.048 | -1.6 | -3.126 | -4.4 | -0.302 | -2.584 |
09 | -2.234 | -4.4 | -3.126 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | 2.64 | -1.77 | -1.022 | -0.346 | -1.215 | -2.234 | -3.126 | -3.126 |
10 | 2.645 | -2.234 | -1.6 | -2.584 | -1.328 | -4.4 | -4.4 | -4.4 | -0.938 | -3.126 | -4.4 | -4.4 | -0.302 | -4.4 | -4.4 | -4.4 |
11 | 1.936 | 1.259 | 0.957 | 0.881 | -2.584 | -4.4 | -3.126 | -3.126 | -1.975 | -4.4 | -2.584 | -4.4 | -4.4 | -2.584 | -4.4 | -4.4 |
12 | 0.595 | 0.425 | 0.339 | 0.881 | -0.392 | -0.074 | -1.975 | 0.63 | -0.392 | -0.22 | -0.543 | -0.392 | -0.721 | -0.658 | -0.788 | 0.023 |