Model info
Transcription factorSTAT1
ModelSTAT1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensushbhnYTTCCnRGAARhShb
Best auROC (human)0.9867406475855036
Best auROC (mouse)0.9102927574071908
Peak sets in benchmark (human)37
Peak sets in benchmark (mouse)128
Aligned words500
TF familySTAT factors{6.2.1}
TF subfamilySTAT1{6.2.1.0.1}
HGNC11362
EntrezGene6772
UniProt IDSTAT1_HUMAN
UniProt ACP42224
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.12481
0.0005 5.26181
0.0001 7.602360000000001
GTEx tissue expression atlas STAT1 expression
ReMap ChIP-seq dataset list STAT1 datasets
Motifs in JASPAR
PCM
ACGT
01101.0214.060.0125.0
0247.0284.085.084.0
0366.0278.055.0101.0
04147.0178.0102.073.0
0543.0103.050.0304.0
061.08.02.0489.0
074.03.06.0487.0
0815.0482.01.02.0
0919.0411.01.069.0
10117.0152.071.0160.0
11134.013.0341.012.0
1216.07.0402.075.0
13472.019.05.04.0
14494.01.02.03.0
15290.053.0116.041.0
16137.098.055.0210.0
1729.0294.0124.053.0
18171.0131.034.0164.0
1967.0267.069.097.0
PWM
ACGT
01-0.210.533-0.7210.0
02-0.9580.814-0.38-0.392
03-0.6280.793-0.805-0.21
040.160.35-0.201-0.529
05-1.044-0.191-0.8980.881
06-3.903-2.584-3.5731.355
07-3.126-3.325-2.8191.351
08-2.0341.34-3.903-3.573
09-1.8181.182-3.903-0.584
10-0.0650.193-0.5560.244
110.069-2.1630.996-2.234
12-1.975-2.6941.16-0.503
131.32-1.818-2.961-3.126
141.365-3.903-3.573-3.325
150.835-0.841-0.074-1.09
160.091-0.24-0.8050.514
17-1.4210.848-0.008-0.841
180.310.046-1.270.269
19-0.6130.752-0.584-0.25