Model info
| Transcription factor | Stat1 | ||||||||
| Model | STAT1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 22 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dRRRAAhdGAAAvhvMvnvhdd | ||||||||
| Best auROC (human) | 0.989 | ||||||||
| Best auROC (mouse) | 0.958 | ||||||||
| Peak sets in benchmark (human) | 37 | ||||||||
| Peak sets in benchmark (mouse) | 128 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | STAT factors {6.2.1} | ||||||||
| TF subfamily | STAT1 {6.2.1.0.1} | ||||||||
| MGI | MGI:103063 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | STAT1_MOUSE | ||||||||
| UniProt AC | P42225 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Stat1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 238.0 | 47.0 | 165.0 | 50.0 |
| 02 | 184.0 | 37.0 | 254.0 | 25.0 |
| 03 | 179.0 | 21.0 | 292.0 | 8.0 |
| 04 | 362.0 | 9.0 | 122.0 | 7.0 |
| 05 | 465.0 | 18.0 | 17.0 | 0.0 |
| 06 | 422.0 | 17.0 | 42.0 | 19.0 |
| 07 | 171.0 | 165.0 | 71.0 | 93.0 |
| 08 | 166.0 | 56.0 | 80.0 | 198.0 |
| 09 | 73.0 | 6.0 | 419.0 | 2.0 |
| 10 | 455.0 | 8.0 | 26.0 | 11.0 |
| 11 | 466.0 | 10.0 | 22.0 | 2.0 |
| 12 | 462.0 | 7.0 | 23.0 | 8.0 |
| 13 | 100.0 | 251.0 | 127.0 | 22.0 |
| 14 | 88.0 | 115.0 | 29.0 | 268.0 |
| 15 | 114.0 | 118.0 | 195.0 | 73.0 |
| 16 | 369.0 | 47.0 | 39.0 | 45.0 |
| 17 | 277.0 | 73.0 | 81.0 | 69.0 |
| 18 | 254.0 | 47.0 | 152.0 | 47.0 |
| 19 | 108.0 | 144.0 | 186.0 | 62.0 |
| 20 | 243.0 | 101.0 | 61.0 | 95.0 |
| 21 | 211.0 | 82.0 | 119.0 | 88.0 |
| 22 | 240.0 | 56.0 | 136.0 | 68.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.638 | -0.958 | 0.275 | -0.898 |
| 02 | 0.383 | -1.189 | 0.703 | -1.561 |
| 03 | 0.355 | -1.725 | 0.841 | -2.584 |
| 04 | 1.055 | -2.484 | -0.024 | -2.694 |
| 05 | 1.305 | -1.868 | -1.92 | -4.4 |
| 06 | 1.208 | -1.92 | -1.067 | -1.818 |
| 07 | 0.31 | 0.275 | -0.556 | -0.291 |
| 08 | 0.281 | -0.788 | -0.439 | 0.455 |
| 09 | -0.529 | -2.819 | 1.201 | -3.573 |
| 10 | 1.283 | -2.584 | -1.525 | -2.311 |
| 11 | 1.307 | -2.394 | -1.681 | -3.573 |
| 12 | 1.298 | -2.694 | -1.64 | -2.584 |
| 13 | -0.22 | 0.691 | 0.016 | -1.681 |
| 14 | -0.346 | -0.082 | -1.421 | 0.756 |
| 15 | -0.091 | -0.057 | 0.44 | -0.529 |
| 16 | 1.074 | -0.958 | -1.138 | -1.0 |
| 17 | 0.789 | -0.529 | -0.427 | -0.584 |
| 18 | 0.703 | -0.958 | 0.193 | -0.958 |
| 19 | -0.144 | 0.14 | 0.393 | -0.689 |
| 20 | 0.659 | -0.21 | -0.705 | -0.271 |
| 21 | 0.519 | -0.415 | -0.049 | -0.346 |
| 22 | 0.646 | -0.788 | 0.083 | -0.599 |