Model info
| Transcription factor | Stat4 | ||||||||
| Model | STAT4_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | YTTCYhdKMM | ||||||||
| Best auROC (human) | 0.932 | ||||||||
| Best auROC (mouse) | 0.914 | ||||||||
| Peak sets in benchmark (human) | 7 | ||||||||
| Peak sets in benchmark (mouse) | 10 | ||||||||
| Aligned words | 475 | ||||||||
| TF family | STAT factors {6.2.1} | ||||||||
| TF subfamily | STAT4 {6.2.1.0.4} | ||||||||
| MGI | MGI:103062 | ||||||||
| EntrezGene | GeneID:20849 (SSTAR profile) | ||||||||
| UniProt ID | STAT4_MOUSE | ||||||||
| UniProt AC | P42228 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Stat4 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 31.0 | 167.0 | 26.0 | 251.0 |
| 02 | 0.0 | 4.0 | 5.0 | 466.0 |
| 03 | 0.0 | 3.0 | 11.0 | 461.0 |
| 04 | 27.0 | 435.0 | 6.0 | 7.0 |
| 05 | 9.0 | 337.0 | 6.0 | 123.0 |
| 06 | 66.0 | 183.0 | 50.0 | 176.0 |
| 07 | 115.0 | 54.0 | 243.0 | 63.0 |
| 08 | 39.0 | 37.0 | 271.0 | 128.0 |
| 09 | 288.0 | 131.0 | 10.0 | 46.0 |
| 10 | 368.0 | 42.0 | 25.0 | 40.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.307 | 0.337 | -1.474 | 0.742 |
| 02 | -4.358 | -3.078 | -2.912 | 1.358 |
| 03 | -4.358 | -3.277 | -2.261 | 1.347 |
| 04 | -1.439 | 1.289 | -2.77 | -2.645 |
| 05 | -2.435 | 1.035 | -2.77 | 0.035 |
| 06 | -0.577 | 0.428 | -0.848 | 0.389 |
| 07 | -0.032 | -0.773 | 0.709 | -0.623 |
| 08 | -1.088 | -1.138 | 0.818 | 0.074 |
| 09 | 0.878 | 0.097 | -2.344 | -0.928 |
| 10 | 1.122 | -1.016 | -1.511 | -1.063 |