Model info
Transcription factorRbpj
ModelSUH_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusbbbTGRGAAvv
Best auROC (human)0.9392496030583853
Best auROC (mouse)0.9729125098038014
Peak sets in benchmark (human)25
Peak sets in benchmark (mouse)6
Aligned words500
TF familyCSL-related factors{6.1.4}
TF subfamilyM{6.1.4.1}
MGI96522
EntrezGene19664
UniProt IDSUH_MOUSE
UniProt ACP31266
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.421035
0.0005 6.21635
0.0001 7.70599
GTEx tissue expression atlas Rbpj expression
Motifs in JASPAR
PCM
ACGT
0151.0165.0177.0107.0
0234.0225.0105.0136.0
0347.0198.0207.048.0
0430.010.015.0445.0
052.05.0478.015.0
0667.02.0379.052.0
075.013.0480.02.0
08430.06.061.03.0
09452.02.032.014.0
10249.098.099.054.0
11207.0105.0116.072.0
PWM
ACGT
01-0.8790.2750.344-0.153
02-1.270.582-0.1720.083
03-0.9580.4550.5-0.938
04-1.389-2.394-2.0341.261
05-3.573-2.9611.332-2.034
06-0.613-3.5731.101-0.86
07-2.961-2.1631.336-3.573
081.227-2.819-0.705-3.325
091.276-3.573-1.328-2.096
100.683-0.24-0.23-0.823
110.5-0.172-0.074-0.543