Model info
Transcription factorTBX19
ModelTBX19_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length22
Quality
D
Motif rank
0
ConsensusdddTMRCAYnTAKGTGTKAhhd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words16587
TF familyBrachyury-related factors{6.5.1}
TF subfamilyTBX19{6.5.1.0.2}
HGNC11596
EntrezGene9095
UniProt IDTBX19_HUMAN
UniProt ACO60806
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.77671
0.0005 2.16256
0.0001 5.11031
GTEx tissue expression atlas TBX19 expression
ReMap ChIP-seq dataset list TBX19 datasets
Motifs in JASPAR
PCM
ACGT
016996.52237.52447.54903.5
023969.252408.253127.257080.25
032642.51970.53167.58804.5
04457.75695.75415.7515015.75
054362.59330.52265.5626.5
069951.25274.255451.25908.25
07177.2516070.25144.25193.25
0814942.25135.251369.25138.25
091354.7510894.75557.753777.75
105040.53503.55569.52471.5
111553.25759.25767.2513505.25
1214303.75121.751056.751102.75
131161.251019.2512513.251891.25
14220.7549.7516215.7598.75
1573.0146.080.016286.0
1686.2578.2516339.2581.25
17449.03125.0145.012866.0
18306.251228.2512434.252616.25
1915611.5283.5401.5288.5
209894.252606.251538.252546.25
217514.752440.752257.754371.75
224922.51983.52125.57553.5
PWM
ACGT
010.523-0.616-0.5270.168
02-0.044-0.543-0.2820.535
03-0.45-0.743-0.2690.753
04-2.199-1.782-2.2951.286
050.0510.811-0.604-1.887
060.875-2.7080.274-1.516
07-3.1391.354-3.342-3.054
081.282-3.406-1.107-3.384
09-1.1170.966-2.002-0.093
100.195-0.1680.295-0.517
11-0.981-1.695-1.6851.18
121.238-3.509-1.365-1.323
13-1.271-1.4011.104-0.784
14-2.923-4.3761.363-3.714
15-4.007-3.33-3.9191.368
16-3.846-3.941.371-3.904
17-2.218-0.283-3.3371.132
18-2.598-1.2151.098-0.46
191.325-2.675-2.329-2.657
200.869-0.464-0.991-0.487
210.594-0.529-0.6070.053
220.172-0.737-0.6680.6