Model info
Transcription factorTBX20
ModelTBX20_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
D
Motif rank
0
ConsensusddSTGnTGAMARvn
Best auROC (human)
Best auROC (mouse)0.88270296514563
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)4
Aligned words500
TF familyTBX1-related factors{6.5.3}
TF subfamilyTBX20{6.5.3.0.5}
HGNC11598
EntrezGene57057
UniProt IDTBX20_HUMAN
UniProt ACQ9UMR3
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.51026
0.0005 5.478009999999999
0.0001 7.46656
GTEx tissue expression atlas TBX20 expression
ReMap ChIP-seq dataset list TBX20 datasets
Motifs in JASPAR
PCM
ACGT
01184.063.0145.0107.0
02138.048.0242.071.0
0315.0132.0307.045.0
0432.052.011.0404.0
0514.06.0477.02.0
06118.0181.068.0132.0
0722.06.030.0441.0
0814.03.0480.02.0
09464.021.013.01.0
1063.0391.035.010.0
11467.01.09.022.0
1270.010.0372.047.0
1354.0168.0230.047.0
14147.0119.067.0166.0
PWM
ACGT
010.385-0.6710.149-0.151
020.1-0.9360.657-0.554
03-2.0320.0560.893-0.998
04-1.326-0.858-2.3091.167
05-2.094-2.8171.332-3.571
06-0.0550.368-0.5970.056
07-1.679-2.817-1.3871.254
08-2.094-3.3231.338-3.571
091.305-1.723-2.161-3.901
10-0.6711.134-1.24-2.392
111.311-3.901-2.482-1.679
12-0.568-2.3921.084-0.956
13-0.8210.2940.606-0.956
140.162-0.047-0.6110.283