Model info
Transcription factorTbx20
ModelTBX20_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
C
Motif rank
0
ConsensusddSTGnTGAMARvn
Best auROC (human)
Best auROC (mouse)0.88270296514563
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)4
Aligned words500
TF familyTBX1-related factors{6.5.3}
TF subfamilyTBX20{6.5.3.0.5}
MGI1888496
EntrezGene57246
UniProt IDTBX20_MOUSE
UniProt ACQ9ES03
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.652559999999999
0.0005 5.62961
0.0001 7.627460000000001
GTEx tissue expression atlas Tbx20 expression
Motifs in JASPAR
PCM
ACGT
01184.063.0145.0107.0
02138.048.0242.071.0
0315.0132.0307.045.0
0432.052.011.0404.0
0514.06.0477.02.0
06118.0181.068.0132.0
0722.06.030.0441.0
0814.03.0480.02.0
09464.021.013.01.0
1063.0391.035.010.0
11467.01.09.022.0
1270.010.0372.047.0
1354.0168.0230.047.0
14147.0119.067.0166.0
PWM
ACGT
010.385-0.6710.149-0.151
020.1-0.9360.657-0.554
03-2.0320.0560.893-0.998
04-1.326-0.858-2.3091.167
05-2.094-2.8171.332-3.571
06-0.0550.368-0.5970.056
07-1.679-2.817-1.3871.254
08-2.094-3.3231.338-3.571
091.305-1.723-2.161-3.901
10-0.6711.134-1.24-2.392
111.311-3.901-2.482-1.679
12-0.568-2.3921.084-0.956
13-0.8210.2940.606-0.956
140.162-0.047-0.6110.283