Model info
Transcription factorTBX21
ModelTBX21_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusvdvddRSTGWKRn
Best auROC (human)0.8291042168977117
Best auROC (mouse)0.8313936364453818
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)17
Aligned words497
TF familyTBrain-related factors{6.5.2}
TF subfamilyTBX21 (T-bet){6.5.2.0.3}
HGNC11599
EntrezGene30009
UniProt IDTBX21_HUMAN
UniProt ACQ9UL17
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.1708099999999995
0.0005 5.78736
0.0001 7.01686
GTEx tissue expression atlas TBX21 expression
ReMap ChIP-seq dataset list TBX21 datasets
Motifs in JASPAR
PCM
ACGT
01106.0100.0217.071.0
02106.057.0156.0175.0
0363.092.0283.056.0
04163.054.0165.0112.0
05243.026.0159.066.0
0694.04.0346.050.0
0728.0147.0297.022.0
0824.04.04.0462.0
091.01.0478.014.0
1073.062.060.0299.0
1121.081.0303.089.0
12297.09.0157.031.0
13186.094.0128.086.0
PWM
ACGT
01-0.151-0.2080.558-0.544
02-0.151-0.7590.2310.345
03-0.661-0.290.822-0.776
040.274-0.8110.287-0.096
050.671-1.5130.25-0.616
06-0.269-3.1151.022-0.886
07-1.4430.1720.87-1.67
08-1.588-3.115-3.1151.31
09-3.892-3.8921.344-2.085
10-0.517-0.677-0.7090.877
11-1.713-0.4150.89-0.323
120.87-2.4730.237-1.346
130.405-0.2690.035-0.357