Model info
Transcription factorTbx2
ModelTBX2_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length25
Quality
D
Motif rank
0
ConsensushbMhWhChbAGGTGTGAnRWKnSMn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words9
TF familyTBX2-related factors{6.5.4}
TF subfamilyTBX2{6.5.4.0.1}
MGI98494
EntrezGene21385
UniProt IDTBX2_MOUSE
UniProt ACQ60707
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.91466
0.0005 5.74841
0.0001 7.50806
GTEx tissue expression atlas Tbx2 expression
Motifs in JASPAR
PCM
ACGT
011.5531.5530.54.395
020.9471.0534.1051.895
032.1053.8952.00.0
042.9473.0530.9471.053
054.01.8950.02.105
062.9471.0530.9473.053
070.07.0530.00.947
084.2111.8950.01.895
091.0532.03.0531.895
106.9470.00.01.053
111.0530.06.9470.0
121.0530.06.9470.0
131.0530.00.06.947
140.00.06.9471.053
152.1050.00.05.895
160.01.0536.9470.0
176.9471.0530.00.0
184.00.04.00.0
194.01.8952.1050.0
203.0532.00.02.947
210.9470.05.1581.895
221.0533.8951.0532.0
230.02.9474.1050.947
244.1052.9470.9470.0
251.5263.5261.4211.526
PWM
ACGT
01-0.195-0.195-0.9050.668
02-0.541-0.4720.607-0.043
030.0410.5610.0-1.578
040.3190.349-0.541-0.472
050.584-0.043-1.5780.041
060.319-0.472-0.5410.349
07-1.5781.1-1.578-0.541
080.63-0.043-1.578-0.043
09-0.4720.00.349-0.043
101.086-1.578-1.578-0.472
11-0.472-1.5781.086-1.578
12-0.472-1.5781.086-1.578
13-0.472-1.578-1.5781.086
14-1.578-1.5781.086-0.472
150.041-1.578-1.5780.934
16-1.578-0.4721.086-1.578
171.086-0.472-1.578-1.578
180.584-1.5780.584-1.578
190.584-0.0430.041-1.578
200.3490.0-1.5780.319
21-0.541-1.5780.812-0.043
22-0.4720.561-0.4720.0
23-1.5780.3190.607-0.541
240.6070.319-0.541-1.578
25-0.2080.474-0.261-0.208