Model info
Transcription factorTbx3
ModelTBX3_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
B
Motif rank
0
ConsensusRRGGTGbbR
Best auROC (human)0.756
Best auROC (mouse)0.955
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)3
Aligned words114
TF familyTBX2-related factors {6.5.4}
TF subfamilyTBX3 {6.5.4.0.2}
MGIMGI:98495
EntrezGeneGeneID:21386
(SSTAR profile)
UniProt IDTBX3_MOUSE
UniProt ACP70324
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.3725249999999996
0.0005 6.184559999999999
0.0001 7.350815000000001
GTEx tissue expression atlas Tbx3 expression
Motifs in JASPAR
PCM
ACGT
0152.017.042.03.0
0277.00.030.07.0
0316.02.095.01.0
040.02.0111.01.0
050.00.02.0112.0
060.01.0113.00.0
072.049.024.039.0
0813.028.035.038.0
0968.03.027.016.0
PWM
ACGT
010.583-0.490.375-1.959
020.968-3.2220.049-1.288
03-0.547-2.2321.176-2.609
04-3.222-2.2321.33-2.609
05-3.222-3.222-2.2321.338
06-3.222-2.6091.347-3.222
07-2.2320.525-0.1640.303
08-0.738-0.0170.1980.278
090.846-1.959-0.052-0.547