Model info
Transcription factorTbx5
ModelTBX5_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length8
Quality
D
Motif rank
0
ConsensusARGTGKSW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words38
TF familyTBX2-related factors{6.5.4}
TF subfamilyTBX5{6.5.4.0.4}
MGI102541
EntrezGene21388
UniProt IDTBX5_MOUSE
UniProt ACP70326
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.26747
0.0005 6.01929
0.0001 7.440295
GTEx tissue expression atlas Tbx5 expression
Motifs in JASPAR
PCM
ACGT
0132.2590.02.2862.455
029.2291.52426.2470.0
030.00.037.00.0
040.00.7620.036.238
050.00.037.00.0
065.8420.7626.60423.792
070.7628.8924.33.048
0827.7921.7993.3234.085
PWM
ACGT
011.184-2.42-1.158-1.106
02-0.002-1.4310.984-2.42
03-2.42-2.421.317-2.42
04-2.42-1.808-2.421.297
05-2.42-2.421.317-2.42
06-0.409-1.808-0.3020.889
07-1.808-0.0360.909-0.944
081.039-1.324-0.876-0.711