Model info
Transcription factorTCF7
ModelTCF7_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusdvhvWSWTSAAARvnv
Best auROC (human)0.8469578822068354
Best auROC (mouse)0.9287230582673612
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)19
Aligned words500
TF familyTCF-7-related factors{4.1.3}
TF subfamilyTCF-7 (TCF-1) [1]{4.1.3.0.1}
HGNC11639
EntrezGene6932
UniProt IDTCF7_HUMAN
UniProt ACP36402
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.63106
0.0005 6.48691
0.0001 8.221060000000001
GTEx tissue expression atlas TCF7 expression
ReMap ChIP-seq dataset list TCF7 datasets
Motifs in JASPAR
PCM
ACGT
01229.064.0137.070.0
02226.0121.095.058.0
03141.0226.064.069.0
04147.0240.079.034.0
05380.027.044.049.0
0615.0341.0137.07.0
07340.033.01.0126.0
0857.010.014.0419.0
0933.0350.0106.011.0
10480.06.03.011.0
11432.034.030.04.0
12450.01.036.013.0
1395.020.0379.06.0
14120.0107.0243.030.0
15164.0123.0151.062.0
16222.095.098.085.0
PWM
ACGT
010.6-0.6580.091-0.57
020.587-0.032-0.271-0.754
030.1190.587-0.658-0.584
040.160.646-0.452-1.27
051.104-1.489-1.022-0.918
06-2.0340.9960.091-2.694
070.993-1.298-3.9030.008
08-0.771-2.394-2.0961.201
09-1.2981.022-0.163-2.311
101.336-2.819-3.325-2.311
111.231-1.27-1.389-3.126
121.272-3.903-1.215-2.163
13-0.271-1.771.101-2.819
14-0.04-0.1530.659-1.389
150.269-0.0160.187-0.689
160.569-0.271-0.24-0.38