Model info
Transcription factorTcf7
ModelTCF7_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusvvRvWdSAAARvvvvv
Best auROC (human)0.7796942799050669
Best auROC (mouse)0.9466442132482322
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)19
Aligned words500
TF familyTCF-7-related factors{4.1.3}
TF subfamilyTCF-7 (TCF-1) [1]{4.1.3.0.1}
MGI98507
EntrezGene21414
UniProt IDTCF7_MOUSE
UniProt ACQ00417
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.85101
0.0005 6.5941600000000005
0.0001 8.057860000000002
GTEx tissue expression atlas Tcf7 expression
Motifs in JASPAR
PCM
ACGT
01164.0136.0154.046.0
02222.096.0162.020.0
03333.029.0115.023.0
04100.0182.0209.09.0
05353.040.023.084.0
06137.013.099.0251.0
0745.0281.0158.016.0
08478.02.06.014.0
09440.019.040.01.0
10435.010.044.011.0
11113.033.0342.012.0
12150.0111.0192.047.0
13193.0132.0149.026.0
14216.0106.0157.021.0
15176.0111.0150.063.0
16138.0170.0152.040.0
PWM
ACGT
010.2690.0830.206-0.979
020.569-0.260.256-1.77
030.972-1.421-0.082-1.64
04-0.220.3720.509-2.484
051.03-1.114-1.64-0.392
060.091-2.163-0.230.691
07-1.00.8030.232-1.975
081.332-3.573-2.819-2.096
091.25-1.818-1.114-3.903
101.238-2.394-1.022-2.311
11-0.1-1.2980.999-2.234
120.18-0.1170.425-0.958
130.430.0540.174-1.525
140.542-0.1630.225-1.725
150.339-0.1170.18-0.673
160.0980.3040.193-1.114