Model info
Transcription factorTGIF2LX
ModelTF2LX_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length15
Quality
D
Motif rank
0
ConsensusRYhnTdACAKCTnTC
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words14
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyTGIF{3.1.4.6}
HGNC18570
EntrezGene90316
UniProt IDTF2LX_HUMAN
UniProt ACQ8IUE1
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.89391
0.0005 5.66771
0.0001 7.30341
GTEx tissue expression atlas TGIF2LX expression
ReMap ChIP-seq dataset list TGIF2LX datasets
Motifs in JASPAR
PCM
ACGT
018.250.254.251.25
021.08.00.05.0
034.02.01.07.0
047.03.02.02.0
052.01.00.011.0
062.00.010.02.0
0714.00.00.00.0
080.012.00.02.0
0914.00.00.00.0
101.02.08.03.0
110.012.00.02.0
120.250.251.2512.25
131.251.2510.251.25
140.50.51.511.5
151.7510.750.750.75
PWM
ACGT
010.762-1.520.166-0.778
02-0.9190.733-1.8410.308
030.114-0.447-0.9190.611
040.611-0.128-0.447-0.447
05-0.447-0.919-1.8411.031
06-0.447-1.8410.941-0.447
071.26-1.841-1.841-1.841
08-1.8411.113-1.841-0.447
091.26-1.841-1.841-1.841
10-0.919-0.4470.733-0.128
11-1.8411.113-1.841-0.447
12-1.52-1.52-0.7781.133
13-0.778-0.7780.964-0.778
14-1.277-1.277-0.6551.073
15-0.5461.009-1.082-1.082