Transcription factor | TFAP4 (GeneCards) | ||||||||
Model | TFAP4_HUMAN.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 10 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | hCAGCTGdKb | ||||||||
Best auROC (human) | 0.923 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 7 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 503 | ||||||||
TF family | bHLH-ZIP factors {1.2.6} | ||||||||
TF subfamily | AP-4 {1.2.6.4} | ||||||||
HGNC | HGNC:11745 | ||||||||
EntrezGene | GeneID:7023 (SSTAR profile) | ||||||||
UniProt ID | TFAP4_HUMAN | ||||||||
UniProt AC | Q01664 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | TFAP4 expression | ||||||||
ReMap ChIP-seq dataset list | TFAP4 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 71.0 | 257.0 | 32.0 | 140.0 |
02 | 2.0 | 498.0 | 0.0 | 0.0 |
03 | 496.0 | 0.0 | 0.0 | 4.0 |
04 | 0.0 | 6.0 | 490.0 | 4.0 |
05 | 5.0 | 487.0 | 8.0 | 0.0 |
06 | 1.0 | 1.0 | 1.0 | 497.0 |
07 | 0.0 | 0.0 | 499.0 | 1.0 |
08 | 137.0 | 64.0 | 90.0 | 209.0 |
09 | 28.0 | 29.0 | 181.0 | 262.0 |
10 | 39.0 | 172.0 | 109.0 | 180.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.556 | 0.714 | -1.328 | 0.112 |
02 | -3.573 | 1.373 | -4.4 | -4.4 |
03 | 1.369 | -4.4 | -4.4 | -3.126 |
04 | -4.4 | -2.819 | 1.357 | -3.126 |
05 | -2.961 | 1.351 | -2.584 | -4.4 |
06 | -3.903 | -3.903 | -3.903 | 1.371 |
07 | -4.4 | -4.4 | 1.375 | -3.903 |
08 | 0.091 | -0.658 | -0.324 | 0.509 |
09 | -1.454 | -1.421 | 0.366 | 0.734 |
10 | -1.138 | 0.316 | -0.135 | 0.361 |