Model info
Transcription factorTcf3
ModelTFE2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusvMCASCTGShn
Best auROC (human)0.9255476630449558
Best auROC (mouse)0.9773963428040655
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)60
Aligned words503
TF familyE2A-related factors{1.2.1}
TF subfamilyE2A (TCF-3, ITF-1){1.2.1.0.1}
MGI98510
EntrezGene21423
UniProt IDTFE2_MOUSE
UniProt ACP15806
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.01058
0.0005 5.0991
0.0001 7.66341
GTEx tissue expression atlas Tcf3 expression
Motifs in JASPAR
PCM
ACGT
01111.0247.0126.016.0
02251.0162.085.02.0
037.0490.03.00.0
04497.00.00.03.0
052.0163.0327.08.0
062.0397.0101.00.0
070.01.01.0498.0
084.03.0492.01.0
093.0374.075.048.0
10253.080.028.0139.0
1163.0116.0205.0116.0
PWM
ACGT
01-0.1170.6750.008-1.975
020.6910.256-0.38-3.573
03-2.6941.357-3.325-4.4
041.371-4.4-4.4-3.325
05-3.5730.2630.954-2.584
06-3.5731.147-0.21-4.4
07-4.4-3.903-3.9031.373
08-3.126-3.3251.361-3.903
09-3.3251.088-0.503-0.938
100.699-0.439-1.4540.105
11-0.673-0.0740.49-0.074