Model info
Transcription factorTGIF2
ModelTGIF2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnTGACASvYRY
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words46893
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyTGIF{3.1.4.6}
HGNC15764
EntrezGene60436
UniProt IDTGIF2_HUMAN
UniProt ACQ9GZN2
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.314425
0.0005 5.3866
0.0001 7.57141
GTEx tissue expression atlas TGIF2 expression
ReMap ChIP-seq dataset list TGIF2 datasets
Motifs in JASPAR
PCM
ACGT
0115740.257200.258788.2514174.25
021194.751185.751158.7542363.75
031077.751079.7542672.751072.75
0445208.093.0301.0301.0
05102.045584.0118.099.0
0644344.25185.251187.25186.25
071125.256575.2532432.255770.25
087250.523557.511105.53989.5
092738.754441.751963.7536758.75
104777.753699.7533300.754124.75
114739.254868.254867.2531428.25
PWM
ACGT
010.316-0.466-0.2670.211
02-2.26-2.268-2.2911.306
03-2.363-2.3611.313-2.368
041.371-4.787-3.632-3.632
05-4.6971.379-4.555-4.726
061.352-4.112-2.267-4.107
07-2.32-0.5571.039-0.687
08-0.4590.719-0.033-1.056
09-1.432-0.949-1.7641.164
10-0.876-1.1311.065-1.023
11-0.884-0.857-0.8571.007