Model info
Transcription factorTHRB
ModelTHB_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length17
Quality
C
Motif rank
0
ConsensusvRvSYvMbvKSAGGTCA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words38
TF familyThyroid hormone receptor-related factors (NR1){2.1.2}
TF subfamilyThyroid hormone receptors (NR1A){2.1.2.2}
HGNC11799
EntrezGene7068
UniProt IDTHB_HUMAN
UniProt ACP10828
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.39761
0.0005 5.27046
0.0001 7.085260000000001
GTEx tissue expression atlas THRB expression
ReMap ChIP-seq dataset list THRB datasets
Motifs in JASPAR
PCM
ACGT
018.0146.82617.7492.909
0220.1830.011.0414.274
035.46110.32918.0461.662
043.91810.80418.6392.137
050.010.3294.98620.183
065.10517.2159.8543.324
0723.5074.2743.7993.918
082.73112.1114.6036.055
0911.2798.90413.6531.662
100.02.1378.31125.05
113.32416.26514.841.068
1234.4290.01.0680.0
130.00.032.8862.612
140.00.034.4291.068
159.8540.00.83124.813
161.929.0873.4431.068
1730.3935.1050.00.0
PWM
ACGT
01-0.092-0.2350.646-0.944
020.769-2.3930.2-0.637
03-0.430.1390.662-1.341
04-0.7080.180.693-1.171
05-2.3930.139-0.5080.769
06-0.4880.6170.096-0.84
070.916-0.637-0.733-0.708
08-0.9920.2860.462-0.341
090.220.0030.398-1.341
10-2.393-1.171-0.0590.977
11-0.840.5630.477-1.606
121.286-2.393-1.606-2.393
13-2.393-2.3931.241-1.025
14-2.393-2.3931.286-1.606
150.096-2.393-1.7350.968
16-1.2521.122-0.812-1.606
171.164-0.488-2.393-2.393