Model info
Transcription factorTHRB
ModelTHB_HUMAN.H11MO.1.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
1
ConsensusbvTSAGGTCA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words58
TF familyThyroid hormone receptor-related factors (NR1){2.1.2}
TF subfamilyThyroid hormone receptors (NR1A){2.1.2.2}
HGNC11799
EntrezGene7068
UniProt IDTHB_HUMAN
UniProt ACP10828
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.815295000000001
0.0005 5.60145
0.0001 7.180575
GTEx tissue expression atlas THRB expression
ReMap ChIP-seq dataset list THRB datasets
Motifs in JASPAR
PCM
ACGT
013.56915.82122.24410.111
028.20811.89526.8834.758
030.02.14110.11139.492
043.21229.26218.21.071
0550.7920.00.9520.0
060.04.87744.1312.736
071.193.92545.5581.071
089.9920.00.041.752
091.07149.6031.0710.0
1044.9045.650.2970.892
PWM
ACGT
01-1.1170.1880.512-0.227
02-0.415-0.0780.694-0.885
03-2.647-1.493-0.2271.067
04-1.1990.7760.321-1.912
051.313-2.647-1.972-2.647
06-2.647-0.8651.176-1.319
07-1.856-1.0421.207-1.912
08-0.238-2.647-2.6471.122
09-1.9121.29-1.912-2.647
101.193-0.741-2.384-2.003