Model info
Transcription factorTLX1
ModelTLX1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length17
Quality
D
Motif rank
0
ConsensushYKKYAvbndvMYnRKd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words50
TF familyNK-related factors{3.1.2}
TF subfamilyTLX{3.1.2.21}
HGNC5056
EntrezGene3195
UniProt IDTLX1_HUMAN
UniProt ACP31314
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.044309999999999
0.0005 5.6631599999999995
0.0001 6.9417100000000005
GTEx tissue expression atlas TLX1 expression
ReMap ChIP-seq dataset list TLX1 datasets
Motifs in JASPAR
PCM
ACGT
019.23621.1517.60512.008
021.63117.9462.53827.884
030.8161.63136.13211.42
047.3423.26330.3329.064
050.81627.8840.81620.484
0642.3341.3860.8165.465
0719.17717.6137.7455.465
085.21915.98216.14812.651
0913.787.09612.6416.484
1014.5174.97313.46717.043
118.1578.15733.6850.0
1211.4231.2380.07.342
132.44733.5950.013.958
1425.4376.6178.9738.973
1533.270.8168.7287.187
163.5885.21929.9411.254
1714.1266.62720.4188.828
PWM
ACGT
01-0.2770.496-0.451-0.037
02-1.6420.339-1.3440.761
03-2.017-1.6421.013-0.083
04-0.482-1.1560.843-0.294
05-2.0170.761-2.0170.465
061.167-1.741-2.017-0.738
070.4020.322-0.435-0.738
08-0.7770.230.240.011
090.091-0.5120.010.259
100.139-0.8170.0690.29
11-0.389-0.3890.945-2.623
12-0.0830.871-2.623-0.482
13-1.370.942-2.6230.103
140.673-0.574-0.303-0.303
150.933-2.017-0.328-0.501
16-1.083-0.7770.83-0.097
170.114-0.5720.462-0.318