Model info
Transcription factorTlx1
ModelTLX1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length17
Quality
D
Motif rank
0
ConsensushYKKYAvbndvMYnRKd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words50
TF familyNK-related factors{3.1.2}
TF subfamilyTLX{3.1.2.21}
MGI98769
EntrezGene
UniProt IDTLX1_MOUSE
UniProt ACP43345
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.050509999999999
0.0005 5.66821
0.0001 6.943060000000001
GTEx tissue expression atlas Tlx1 expression
Motifs in JASPAR
PCM
ACGT
019.23621.1517.60512.008
021.63117.9462.53827.884
030.8161.63136.13211.42
047.3423.26330.3329.064
050.81627.8840.81620.484
0642.3341.3860.8165.465
0719.17717.6137.7455.465
085.21915.98216.14812.651
0913.787.09612.6416.484
1014.5174.97313.46717.043
118.1578.15733.6850.0
1211.4231.2380.07.342
132.44733.5950.013.958
1425.4376.6178.9738.973
1533.270.8168.7287.187
163.5885.21929.9411.254
1714.1266.62720.4188.828
PWM
ACGT
01-0.2770.496-0.451-0.037
02-1.6420.339-1.3440.761
03-2.017-1.6421.013-0.083
04-0.482-1.1560.843-0.294
05-2.0170.761-2.0170.465
061.167-1.741-2.017-0.738
070.4020.322-0.435-0.738
08-0.7770.230.240.011
090.091-0.5120.010.259
100.139-0.8170.0690.29
11-0.389-0.3890.945-2.623
12-0.0830.871-2.623-0.482
13-1.370.942-2.6230.103
140.673-0.574-0.303-0.303
150.933-2.017-0.328-0.501
16-1.083-0.7770.83-0.097
170.114-0.5720.462-0.318