Model info
Transcription factorTWIST1
ModelTWST1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusvCAKMTGKWWbbvRTYW
Best auROC (human)0.969037249691967
Best auROC (mouse)0.5393526524650786
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)8
Aligned words497
TF familyTal-related factors{1.2.3}
TF subfamilyTwist-like factors{1.2.3.2}
HGNC12428
EntrezGene7291
UniProt IDTWST1_HUMAN
UniProt ACQ15672
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.64816
0.0005 5.68551
0.0001 7.8365100000000005
GTEx tissue expression atlas TWIST1 expression
ReMap ChIP-seq dataset list TWIST1 datasets
Motifs in JASPAR
PCM
ACGT
01252.0133.077.035.0
0235.0432.014.016.0
03459.07.017.014.0
045.041.091.0360.0
0598.0349.040.010.0
061.02.01.0493.0
070.04.0481.012.0
0813.072.0266.0146.0
09145.037.043.0272.0
10142.047.035.0273.0
1158.0133.059.0247.0
1230.0179.045.0243.0
13216.0145.080.056.0
14390.028.044.035.0
158.017.026.0446.0
1646.092.017.0342.0
17326.018.018.0135.0
PWM
ACGT
010.7010.067-0.471-1.236
02-1.2361.237-2.091-1.97
031.298-2.689-1.914-2.091
04-2.955-1.084-0.3071.056
05-0.2341.025-1.108-2.388
06-3.898-3.567-3.8981.369
07-4.395-3.1211.344-2.228
08-2.157-0.5370.7550.159
090.153-1.183-1.0380.777
100.132-0.952-1.2360.78
11-0.7480.067-0.7310.681
12-1.3830.361-0.9940.665
130.5480.153-0.433-0.782
141.135-1.449-1.016-1.236
15-2.578-1.914-1.5191.269
16-0.973-0.296-1.9141.005
170.957-1.862-1.8620.082