Model info
Transcription factorTWIST1
ModelTWST1_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
1
ConsensusnvCATSTGKW
Best auROC (human)0.9714474894455185
Best auROC (mouse)0.5669848448451577
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)8
Aligned words502
TF familyTal-related factors{1.2.3}
TF subfamilyTwist-like factors{1.2.3.2}
HGNC12428
EntrezGene7291
UniProt IDTWST1_HUMAN
UniProt ACQ15672
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.08278
0.0005 6.04882
0.0001 7.83901
GTEx tissue expression atlas TWIST1 expression
ReMap ChIP-seq dataset list TWIST1 datasets
Motifs in JASPAR
PCM
ACGT
01157.0164.0115.064.0
02226.0161.083.030.0
0325.0471.03.01.0
04490.05.03.02.0
052.07.097.0394.0
0648.0374.067.011.0
075.00.01.0494.0
081.02.0494.03.0
0916.071.0296.0117.0
10161.030.044.0265.0
PWM
ACGT
010.2250.269-0.082-0.658
020.5870.25-0.403-1.389
03-1.5611.317-3.325-3.903
041.357-2.961-3.325-3.573
05-3.573-2.694-0.251.14
06-0.9381.088-0.613-2.311
07-2.961-4.4-3.9031.365
08-3.903-3.5731.365-3.325
09-1.975-0.5560.855-0.065
100.25-1.389-1.0220.745