Model info
Transcription factorTwist1
ModelTWST1_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
B
Motif rank
0
ConsensusvCAKMTGKWhbbvATYW
Best auROC (human)0.9688660845860722
Best auROC (mouse)0.5936400979441117
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)8
Aligned words500
TF familyTal-related factors{1.2.3}
TF subfamilyTwist-like factors{1.2.3.2}
MGI98872
EntrezGene22160
UniProt IDTWST1_MOUSE
UniProt ACP26687
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.63691
0.0005 5.66736
0.0001 7.795810000000001
GTEx tissue expression atlas Twist1 expression
Motifs in JASPAR
PCM
ACGT
01224.0141.091.044.0
0227.0448.016.09.0
03451.010.023.016.0
049.032.0129.0330.0
05107.0340.049.04.0
064.01.00.0495.0
070.01.0492.07.0
088.062.0301.0129.0
09138.036.045.0281.0
10140.050.040.0270.0
1151.0145.062.0242.0
1230.0170.058.0242.0
13186.0144.0107.063.0
14408.029.032.031.0
1515.020.038.0427.0
1652.082.017.0349.0
17314.023.036.0127.0
PWM
ACGT
010.5780.119-0.313-1.022
02-1.4891.268-1.975-2.484
031.274-2.394-1.64-1.975
04-2.484-1.3280.0310.963
05-0.1530.993-0.918-3.126
06-3.126-3.903-4.41.367
07-4.4-3.9031.361-2.694
08-2.584-0.6890.8720.031
090.098-1.215-1.00.803
100.112-0.898-1.1140.763
11-0.8790.147-0.6890.655
12-1.3890.304-0.7540.655
130.3930.14-0.153-0.673
141.174-1.421-1.328-1.358
15-2.034-1.77-1.1631.22
16-0.86-0.415-1.921.019
170.914-1.64-1.2150.016