Model info
Transcription factorTwist1
ModelTWST1_MOUSE.H11MO.1.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
B
Motif rank
1
ConsensusvvCAKCTGKhh
Best auROC (human)0.9777298739392504
Best auROC (mouse)0.6036100633429005
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)8
Aligned words470
TF familyTal-related factors{1.2.3}
TF subfamilyTwist-like factors{1.2.3.2}
MGI98872
EntrezGene22160
UniProt IDTWST1_MOUSE
UniProt ACP26687
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.246515
0.0005 6.05342
0.0001 7.798055
GTEx tissue expression atlas Twist1 expression
Motifs in JASPAR
PCM
ACGT
01161.0131.0128.047.0
02241.0110.093.023.0
0311.0438.07.011.0
04407.026.014.020.0
057.026.080.0354.0
0632.0392.034.09.0
075.01.00.0461.0
081.06.0458.02.0
0914.092.0264.097.0
10127.088.048.0204.0
11119.093.065.0190.0
PWM
ACGT
010.3180.1140.091-0.891
020.718-0.059-0.224-1.573
03-2.2441.313-2.629-2.244
041.239-1.458-2.03-1.703
05-2.629-1.458-0.3721.101
06-1.261.202-1.203-2.418
07-2.896-3.842-4.3441.364
08-3.842-2.7531.357-3.51
09-2.03-0.2350.809-0.183
100.083-0.278-0.870.553
110.019-0.224-0.5750.482