Model info
Transcription factorYY2
ModelTYY2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusWhvATGGCGGn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words943
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyYY1-like factors{2.3.3.9}
HGNC31684
EntrezGene404281
UniProt IDTYY2_HUMAN
UniProt ACO15391
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.9781649999999997
0.0005 4.05184
0.0001 6.1020199999999996
GTEx tissue expression atlas YY2 expression
ReMap ChIP-seq dataset list YY2 datasets
Motifs in JASPAR
PCM
ACGT
01498.01843.078116.411153.524
02373.18976.19261.475300.174
03481.77194.398151.67683.185
04787.7117.7737.7737.773
057.940.1670.167802.755
060.00.0811.030.0
070.00.0811.030.0
0810.449783.0287.10410.449
0923.74111.54767.5548.195
1046.52641.843667.43855.223
11240.985267.84126.27175.934
PWM
ACGT
010.894-1.519-0.549-0.276
020.606-0.965-1.1750.39
030.861-0.755-0.288-0.879
041.351-3.074-3.074-3.074
05-3.057-4.709-4.7091.37
06-4.805-4.8051.38-4.805
07-4.805-4.8051.38-4.805
08-2.8251.345-3.148-2.825
09-2.085-2.7391.325-3.031
10-1.445-1.5471.186-1.279
110.1710.276-0.469-0.141