Model info
| Transcription factor | YY2 (GeneCards) | ||||||||
| Model | TYY2_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | WhvATGGCGGn | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 943 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | YY1-like factors {2.3.3.9} | ||||||||
| HGNC | HGNC:31684 | ||||||||
| EntrezGene | GeneID:404281 (SSTAR profile) | ||||||||
| UniProt ID | TYY2_HUMAN | ||||||||
| UniProt AC | O15391 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | YY2 expression | ||||||||
| ReMap ChIP-seq dataset list | YY2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 498.018 | 43.078 | 116.411 | 153.524 |
| 02 | 373.189 | 76.192 | 61.475 | 300.174 |
| 03 | 481.771 | 94.398 | 151.676 | 83.185 |
| 04 | 787.711 | 7.773 | 7.773 | 7.773 |
| 05 | 7.94 | 0.167 | 0.167 | 802.755 |
| 06 | 0.0 | 0.0 | 811.03 | 0.0 |
| 07 | 0.0 | 0.0 | 811.03 | 0.0 |
| 08 | 10.449 | 783.028 | 7.104 | 10.449 |
| 09 | 23.741 | 11.54 | 767.554 | 8.195 |
| 10 | 46.526 | 41.843 | 667.438 | 55.223 |
| 11 | 240.985 | 267.84 | 126.27 | 175.934 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.894 | -1.519 | -0.549 | -0.276 |
| 02 | 0.606 | -0.965 | -1.175 | 0.39 |
| 03 | 0.861 | -0.755 | -0.288 | -0.879 |
| 04 | 1.351 | -3.074 | -3.074 | -3.074 |
| 05 | -3.057 | -4.709 | -4.709 | 1.37 |
| 06 | -4.805 | -4.805 | 1.38 | -4.805 |
| 07 | -4.805 | -4.805 | 1.38 | -4.805 |
| 08 | -2.825 | 1.345 | -3.148 | -2.825 |
| 09 | -2.085 | -2.739 | 1.325 | -3.031 |
| 10 | -1.445 | -1.547 | 1.186 | -1.279 |
| 11 | 0.171 | 0.276 | -0.469 | -0.141 |