Model info
Transcription factorUSF1
ModelUSF1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusvGTCACGTGvbb
Best auROC (human)0.9981812508426887
Best auROC (mouse)0.9804345650948634
Peak sets in benchmark (human)59
Peak sets in benchmark (mouse)7
Aligned words485
TF familybHLH-ZIP factors{1.2.6}
TF subfamilyUSF factors{1.2.6.2}
HGNC12593
EntrezGene7391
UniProt IDUSF1_HUMAN
UniProt ACP22415
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.43741
0.0005 2.7350149999999998
0.0001 5.317915
GTEx tissue expression atlas USF1 expression
ReMap ChIP-seq dataset list USF1 datasets
Motifs in JASPAR
PCM
ACGT
01116.075.0231.058.0
0249.06.0425.00.0
039.010.011.0450.0
040.0480.00.00.0
05477.00.01.02.0
060.0461.06.013.0
0781.03.0396.00.0
082.04.01.0473.0
090.00.0480.00.0
10195.080.0186.019.0
1123.0225.0117.0115.0
1246.0233.0147.054.0
PWM
ACGT
01-0.033-0.4620.649-0.714
02-0.877-2.781.255-4.366
03-2.445-2.354-2.2711.312
04-4.3661.377-4.366-4.366
051.37-4.366-3.867-3.535
06-4.3661.336-2.78-2.123
07-0.387-3.2871.185-4.366
08-3.535-3.088-3.8671.362
09-4.366-4.3661.377-4.366
100.481-0.3990.434-1.778
11-1.60.623-0.025-0.042
12-0.9390.6570.201-0.783