Model info
Transcription factorXBP1
ModelXBP1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
D
Motif rank
0
ConsensusRvdSASGTGKM
Best auROC (human)0.794967705066724
Best auROC (mouse)
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)
Aligned words502
TF familyXBP-1-related factors{1.1.5}
TF subfamilyXBP-1{1.1.5.0.1}
HGNC12801
EntrezGene7494
UniProt IDXBP1_HUMAN
UniProt ACP17861
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.7550099999999995
0.0005 4.523565
0.0001 6.108625
GTEx tissue expression atlas XBP1 expression
ReMap ChIP-seq dataset list XBP1 datasets
Motifs in JASPAR
PCM
ACGT
0177.038.0334.051.0
0287.0217.0175.021.0
0399.054.0120.0227.0
0435.048.0387.030.0
05439.011.032.018.0
0649.0360.051.040.0
078.010.0464.018.0
0811.055.012.0422.0
0916.012.0461.011.0
1039.09.0376.076.0
1172.0355.048.025.0
PWM
ACGT
01-0.477-1.1630.975-0.879
02-0.3570.5460.333-1.725
03-0.23-0.823-0.040.591
04-1.242-0.9381.122-1.389
051.247-2.311-1.328-1.868
06-0.9181.05-0.879-1.114
07-2.584-2.3941.303-1.868
08-2.311-0.805-2.2341.208
09-1.975-2.2341.296-2.311
10-1.138-2.4841.093-0.49
11-0.5431.036-0.938-1.561