Model info
Transcription factorXbp1
ModelXBP1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
C
Motif rank
0
ConsensusGACGTGTMhhWd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1910
TF familyXBP-1-related factors{1.1.5}
TF subfamilyXBP-1{1.1.5.0.1}
MGI98970
EntrezGene22433
UniProt IDXBP1_MOUSE
UniProt ACO35426
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.98061
0.0005 0.8611949999999999
0.0001 3.6423449999999997
GTEx tissue expression atlas Xbp1 expression
Motifs in JASPAR
PCM
ACGT
010.00.01538.36738.26
021576.6270.00.00.0
030.01576.6270.00.0
040.00.01576.6270.0
050.00.00.01576.627
060.490.01573.9872.15
070.00.0686.26890.367
08256.1221192.56533.46594.475
09710.948480.847184.859199.973
10364.63346.114126.736739.147
11530.52249.13335.414961.558
12609.522176.018240.476550.61
PWM
ACGT
01-5.371-5.3711.358-2.29
021.383-5.371-5.371-5.371
03-5.3711.383-5.371-5.371
04-5.371-5.3711.383-5.371
05-5.371-5.371-5.3711.383
06-5.135-5.3711.381-4.597
07-5.371-5.3710.5530.812
08-0.4291.104-2.417-1.414
090.5880.198-0.752-0.674
10-0.077-0.129-1.1250.627
110.296-2.05-2.3640.889
120.434-0.8-0.4910.333