Model info
Transcription factorZNF354A
ModelZ354A_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length24
Quality
C
Motif rank
0
ConsensusdYYYhddYYhYTTMYWYYYRdTRW
Best auROC (human)0.8944272187111193
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words496
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyZNF354A-like factors{2.3.3.64}
HGNC11628
EntrezGene6940
UniProt IDZ354A_HUMAN
UniProt ACO60765
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.15531
0.0005 6.157109999999999
0.0001 8.28266
GTEx tissue expression atlas ZNF354A expression
ReMap ChIP-seq dataset list ZNF354A datasets
Motifs in JASPAR
PCM
ACGT
01234.037.0130.095.0
0238.057.029.0372.0
0316.060.029.0391.0
0420.0116.032.0328.0
05252.099.054.091.0
06127.045.0238.086.0
07124.070.084.0218.0
0834.0267.032.0163.0
0929.0393.013.061.0
10284.075.038.099.0
1136.057.018.0385.0
127.010.015.0464.0
1310.060.024.0402.0
14289.0125.046.036.0
1521.0312.013.0150.0
16312.050.062.072.0
1719.049.040.0388.0
1832.044.027.0393.0
1918.097.026.0355.0
20336.040.067.053.0
21241.050.092.0113.0
2231.016.038.0411.0
2359.051.0338.048.0
2476.059.041.0320.0
PWM
ACGT
010.629-1.1810.047-0.263
02-1.155-0.763-1.4131.09
03-1.968-0.713-1.4131.14
04-1.762-0.066-1.320.965
050.703-0.222-0.815-0.305
060.024-0.9920.646-0.36
070.0-0.562-0.3840.559
08-1.2620.76-1.320.271
09-1.4131.145-2.155-0.697
100.822-0.495-1.155-0.222
11-1.207-0.763-1.861.125
12-2.687-2.386-2.0261.311
13-2.386-0.713-1.5921.168
140.8390.008-0.971-1.207
15-1.7170.915-2.1550.188
160.915-0.89-0.681-0.535
17-1.81-0.91-1.1061.132
18-1.32-1.014-1.4811.145
19-1.86-0.242-1.5171.044
200.989-1.106-0.605-0.834
210.658-0.89-0.294-0.092
22-1.35-1.968-1.1551.19
23-0.729-0.8710.995-0.93
24-0.482-0.729-1.0820.94