Model info
Transcription factorZEB1
ModelZEB1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusbvCAGGTRdR
Best auROC (human)0.9377025886807896
Best auROC (mouse)
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)
Aligned words500
TF familyHD-ZF factors{3.1.8}
TF subfamilyZEB{3.1.8.3}
HGNC11642
EntrezGene6935
UniProt IDZEB1_HUMAN
UniProt ACP37275
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.02046
0.0005 5.91942
0.0001 7.536505
GTEx tissue expression atlas ZEB1 expression
ReMap ChIP-seq dataset list ZEB1 datasets
Motifs in JASPAR
PCM
ACGT
0125.0137.0218.0120.0
02181.0170.0114.035.0
0387.0406.02.05.0
04487.01.01.011.0
0511.02.0476.011.0
065.02.0484.09.0
0773.07.03.0417.0
08157.03.0336.04.0
09220.040.072.0168.0
10104.069.0301.026.0
PWM
ACGT
01-1.5610.0910.551-0.04
020.3660.304-0.091-1.242
03-0.3571.17-3.573-2.961
041.351-3.903-3.903-2.311
05-2.311-3.5731.328-2.311
06-2.961-3.5731.345-2.484
07-0.529-2.694-3.3251.196
080.225-3.3250.981-3.126
090.56-1.114-0.5430.293
10-0.181-0.5840.872-1.525