Model info
Transcription factorZeb1
ModelZEB1_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
B
Motif rank
0
ConsensusbvCAGGTRdR
Best auROC (human)0.9377025886807896
Best auROC (mouse)
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)
Aligned words500
TF familyHD-ZF factors{3.1.8}
TF subfamilyZEB{3.1.8.3}
MGI1344313
EntrezGene21417
UniProt IDZEB1_MOUSE
UniProt ACQ64318
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.162655
0.0005 6.0661000000000005
0.0001 7.6321449999999995
GTEx tissue expression atlas Zeb1 expression
Motifs in JASPAR
PCM
ACGT
0125.0137.0218.0120.0
02181.0170.0114.035.0
0387.0406.02.05.0
04487.01.01.011.0
0511.02.0476.011.0
065.02.0484.09.0
0773.07.03.0417.0
08157.03.0336.04.0
09220.040.072.0168.0
10104.069.0301.026.0
PWM
ACGT
01-1.5610.0910.551-0.04
020.3660.304-0.091-1.242
03-0.3571.17-3.573-2.961
041.351-3.903-3.903-2.311
05-2.311-3.5731.328-2.311
06-2.961-3.5731.345-2.484
07-0.529-2.694-3.3251.196
080.225-3.3250.981-3.126
090.56-1.114-0.5430.293
10-0.181-0.5840.872-1.525