Model info
Transcription factorZFP28
ModelZFP28_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
C
Motif rank
0
ConsensusYTCYRTTTCYTCWKRWKTSA
Best auROC (human)0.9926880834582423
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words417
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyunclassified{2.3.3.0}
HGNC17801
EntrezGene140612
UniProt IDZFP28_HUMAN
UniProt ACQ8NHY6
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.06566
0.0005 4.38941
0.0001 7.16976
GTEx tissue expression atlas ZFP28 expression
ReMap ChIP-seq dataset list ZFP28 datasets
Motifs in JASPAR
PCM
ACGT
0142.079.025.0271.0
025.04.01.0407.0
031.0363.00.053.0
0437.067.09.0304.0
05266.030.087.034.0
064.044.01.0368.0
075.033.05.0374.0
081.010.01.0405.0
093.0376.05.033.0
1043.079.01.0294.0
1114.010.02.0391.0
123.0336.06.072.0
1350.040.014.0313.0
1426.021.0110.0260.0
1573.021.0267.056.0
16151.09.066.0191.0
1735.018.0328.036.0
1820.017.022.0358.0
1935.0283.065.034.0
20359.013.014.031.0
PWM
ACGT
01-0.888-0.273-1.3840.947
02-2.788-2.955-3.7421.351
03-3.7421.237-4.25-0.663
04-1.01-0.434-2.3091.061
050.928-1.211-0.178-1.091
06-2.955-0.843-3.7421.251
07-2.788-1.12-2.7881.267
08-3.742-2.218-3.7421.346
09-3.1551.272-2.788-1.12
10-0.865-0.273-3.7421.028
11-1.92-2.218-3.4061.311
12-3.1551.16-2.645-0.364
13-0.719-0.935-1.921.09
14-1.347-1.5470.0530.905
15-0.35-1.5470.932-0.609
160.366-2.309-0.4490.599
17-1.064-1.691.136-1.037
18-1.593-1.743-1.5041.224
19-1.0640.99-0.464-1.091
201.226-1.986-1.92-1.18