Model info
Transcription factorZfp42
ModelZFP42_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusvRShGCCATYTY
Best auROC (human)0.9094744481238392
Best auROC (mouse)0.8002174713488021
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)2
Aligned words500
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyYY1-like factors{2.3.3.9}
MGI99187
EntrezGene22702
UniProt IDZFP42_MOUSE
UniProt ACP22227
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.42336
0.0005 5.42548
0.0001 7.4503900000000005
GTEx tissue expression atlas Zfp42 expression
Motifs in JASPAR
PCM
ACGT
01100.069.0272.059.0
0261.027.0378.034.0
0371.0295.098.036.0
04248.0164.043.045.0
0511.014.0394.081.0
0640.0442.010.08.0
070.0491.04.05.0
08495.04.01.00.0
091.04.08.0487.0
1021.0127.048.0304.0
1133.034.029.0404.0
1214.0101.010.0375.0
PWM
ACGT
01-0.22-0.5840.771-0.737
02-0.705-1.4891.098-1.27
03-0.5560.852-0.24-1.215
040.6790.269-1.044-1.0
05-2.311-2.0961.14-0.427
06-1.1141.254-2.394-2.584
07-4.41.359-3.126-2.961
081.367-3.126-3.903-4.4
09-3.903-3.126-2.5841.351
10-1.7250.016-0.9380.881
11-1.298-1.27-1.4211.165
12-2.096-0.21-2.3941.09